XomeDxSlice Tool

Now Available - NEW XomeDxSlice Xpanded – Custom slice testing with trio analysis for lists >150 genes.

INSTRUCTIONS (AND TIPS)

ENTER GENES BELOW AND CLICK "ADD GENES TO SLICE"

If cutting and pasting from another document, please be sure to list EITHER one gene symbol per line OR enter a comma-separated list.


OR

SEARCH BY GENE SYMBOL OR PHENOTYPE (HPO TERM)

You may also use this search to review average exome sequencing coverage by entering the gene symbol below.

SELECTED GENES FOR YOUR SLICE

What do you want to do?

Place an e-order of this Slice on a specific patient through the GeneDx Portal  
Obtain a Slice ID to order testing with a printed requisition form  
Only email the gene list to myself and/or others at this time  


 
Phenotypes
Panhypogammaglobulinemia

Select all: Gene symbolChrAvg % covered at 10xLocus TypeNoteOMIMPrevious symbol(s)Phenotype(s)Slice(s)
BTKXq22.199.99%gene with protein product300300AGMX1, IMD1Abnormality of the tonsils; Agammaglobulinemia; Arthritis; Cellulitis; Chronic diarrhea; Chronic otitis media; Conjunctivitis; Cor pulmonale; Delayed skeletal maturation; Delayed speech and language development; Diarrhea; Encephalitis; Enteroviral dermatomyositis syndrome; Enteroviral hepatitis; Epididymitis; Failure to thrive; Fatigue; Fever; Glossoptosis; Growth hormone deficiency; Hearing impairment; Hypocalcemia; Immunodeficiency; Lymph node hypoplasia; Meningitis; Neoplasm; Neutropenia; Otitis media; Panhypogammaglobulinemia; Pneumonia; Prostatitis; Pyoderma; Recurrent bacterial infections; Recurrent cutaneous abscess formation; Recurrent enteroviral infections; Recurrent pneumonia; Recurrent urinary tract infections; Sensorineural hearing impairment; Sepsis; Septic arthritis; Short stature; Sinusitis; Skin rash; Skin ulcer; X-linked recessive inheritanceAutoimmune Disorders ; Inflammatory Bowel Disease ; Primary Immunodeficiency
CIITA16p13.13100%gene with protein product600005MHC2TAAgammaglobulinemia; Autosomal dominant inheritance; Autosomal recessive inheritance; Biliary tract abnormality; Chronic lymphocytic meningitis; Chronic mucocutaneous candidiasis; Colitis; Cutaneous anergy; Encephalitis; Failure to thrive; Malabsorption; Neutropenia; Panhypogammaglobulinemia; Protracted diarrhea; Recurrent bacterial infections; Recurrent fungal infections; Recurrent lower respiratory tract infections; Recurrent protozoan infections; Recurrent upper respiratory tract infections; Recurrent urinary tract infections; Recurrent viral infections; Villous atrophy; Viral hepatitis
DCLRE1C10p13100%gene with protein product605988SCIDAAbnormal lymphocyte morphology; Absent tonsils; Alopecia; Anemia; Aplasia of the thymus; Aplasia/Hypoplasia of the eyebrow; Autosomal recessive inheritance; B lymphocytopenia; Chronic diarrhea; Desquamation of skin soon after birth; Diarrhea; Dry skin; Edema; Eosinophilia; Erythroderma; Failure to thrive; Fever; Genital ulcers; Hepatomegaly; Hypoplasia of the thymus; Hypoproteinemia; Lymph node hypoplasia; Lymphadenopathy; Oral ulcer; Otitis media; Panhypogammaglobulinemia; Phenotypic variability; Pneumonia; Pruritus; Recurrent bacterial infections; Recurrent fungal infections; Recurrent upper respiratory tract infections; Recurrent viral infections; Severe B lymphocytopenia; Severe combined immunodeficiency; Splenomegaly; Thickened skin; ThrombocytopeniaInflammatory Bowel Disease ; Primary Immunodeficiency
JAK319p13.1199.82%gene with protein product600173Abnormality of the lymph nodes; Autosomal recessive inheritance; Cutaneous anergy; Diarrhea; Failure to thrive; Intestinal obstruction; Meningitis; Panhypogammaglobulinemia; Pneumonia; Recurrent upper respiratory tract infections; Severe combined immunodeficiencyPrimary Immunodeficiency
RAG111p12100%gene with protein product179615Abnormal lymphocyte morphology; Alopecia; Anemia; Aplasia/Hypoplasia of the eyebrow; Arthritis; Autoimmune hemolytic anemia; Autoimmune neutropenia; Autosomal recessive inheritance; B lymphocytopenia; Chronic diarrhea; Combined immunodeficiency; Conjunctivitis; Decrease in T cell count; Desquamation of skin soon after birth; Diarrhea; Dry skin; Edema; Eosinophilia; Erythroderma; Failure to thrive; Failure to thrive secondary to recurrent infections; Fever; Hepatomegaly; Hypoplasia of the thymus; Hypoproteinemia; IgG deficiency; Infantile onset; Interstitial pneumonitis; Lymphadenopathy; Mastoiditis; Meningitis; Otitis media; Panhypogammaglobulinemia; Pneumonia; Pruritus; Recurrent bacterial infections; Recurrent fungal infections; Recurrent opportunistic infections; Recurrent respiratory infections; Recurrent viral infections; Sepsis; Severe B lymphocytopenia; Severe combined immunodeficiency; Splenomegaly; Thickened skin; ThrombocytopeniaAutoimmune Disorders ; Common Variable Immune Deficiency ; Inflammatory Bowel Disease ; Primary Immunodeficiency
RAG211p13100%gene with protein product179616Abnormal lymphocyte morphology; Alopecia; Anemia; Aplasia/Hypoplasia of the eyebrow; Arthritis; Autosomal recessive inheritance; B lymphocytopenia; Chronic diarrhea; Combined immunodeficiency; Conjunctivitis; Decrease in T cell count; Desquamation of skin soon after birth; Diarrhea; Dry skin; Edema; Eosinophilia; Erythroderma; Failure to thrive; Failure to thrive secondary to recurrent infections; Fever; Hepatomegaly; Hypoplasia of the thymus; Hypoproteinemia; IgG deficiency; Infantile onset; Lymphadenopathy; Mastoiditis; Meningitis; Otitis media; Panhypogammaglobulinemia; Pneumonia; Pruritus; Recurrent bacterial infections; Recurrent fungal infections; Recurrent opportunistic infections; Recurrent respiratory infections; Recurrent viral infections; Severe B lymphocytopenia; Severe combined immunodeficiency; Splenomegaly; Thickened skin; ThrombocytopeniaAutoimmune Disorders ; Inflammatory Bowel Disease ; Primary Immunodeficiency
RFX51q21.3100%gene with protein product601863Agammaglobulinemia; Autosomal dominant inheritance; Autosomal recessive inheritance; Biliary tract abnormality; Chronic lymphocytic meningitis; Chronic mucocutaneous candidiasis; Colitis; Cutaneous anergy; Encephalitis; Failure to thrive; Malabsorption; Neutropenia; Panhypogammaglobulinemia; Protracted diarrhea; Recurrent bacterial infections; Recurrent fungal infections; Recurrent lower respiratory tract infections; Recurrent protozoan infections; Recurrent upper respiratory tract infections; Recurrent urinary tract infections; Recurrent viral infections; Villous atrophy; Viral hepatitisAutoimmune Disorders
RFXANK19p13.11100%gene with protein product603200Agammaglobulinemia; Autosomal dominant inheritance; Autosomal recessive inheritance; Biliary tract abnormality; Chronic lymphocytic meningitis; Chronic mucocutaneous candidiasis; Colitis; Cutaneous anergy; Encephalitis; Failure to thrive; Malabsorption; Neutropenia; Panhypogammaglobulinemia; Protracted diarrhea; Recurrent bacterial infections; Recurrent fungal infections; Recurrent lower respiratory tract infections; Recurrent protozoan infections; Recurrent upper respiratory tract infections; Recurrent urinary tract infections; Recurrent viral infections; Villous atrophy; Viral hepatitisAutoimmune Disorders
RFXAP13q13.3100%gene with protein product601861Agammaglobulinemia; Autosomal dominant inheritance; Autosomal recessive inheritance; Biliary tract abnormality; Chronic lymphocytic meningitis; Chronic mucocutaneous candidiasis; Colitis; Cutaneous anergy; Encephalitis; Failure to thrive; Malabsorption; Neutropenia; Panhypogammaglobulinemia; Protracted diarrhea; Recurrent bacterial infections; Recurrent fungal infections; Recurrent lower respiratory tract infections; Recurrent protozoan infections; Recurrent upper respiratory tract infections; Recurrent urinary tract infections; Recurrent viral infections; Villous atrophy; Viral hepatitisAutoimmune Disorders
ZAP702q11.2100%gene with protein product176947SRKAutosomal recessive inheritance; Diarrhea; Eczematoid dermatitis; Failure to thrive; Hepatomegaly; Infantile onset; Panhypogammaglobulinemia; Pneumonia; Proteinuria; Recurrent candida infections; SplenomegalyAutoimmune Disorders ; Inflammatory Bowel Disease ; Primary Immunodeficiency


The gene coverage data provided by GeneDx represent an estimate based on previous results, but the specific sequencing coverage data for the genes selected may vary from individual to individual, and cannot be predicted exactly. Changes to an approved gene list can only be made by contacting GeneDx directly at 888-729-1206 and asking to speak with a member of our Whole Exome Sequencing Laboratory.


  SUGGESTED CUSTOM SLICES  

Customize below OR enter Suggested Slice ID on printed requisition form
(e.g. 706 XomeDxSlice - Slice ID: CS-Albinism).

Suggested Slice IDSuggested Gene List Name
CS-AlbinismAlbinism
CS-AlportAlport Syndrome
CS-AAAplastic Anemia
CS-AutoImmuneAutoimmune Disorders
CS-BBSBardet-Biedl Syndrome
CS-BMFBone Marrow Failure Syndromes
CS-CVIDCommon Variable Immune Deficiency
CS-CKUTCongenital Kidney and Urinary Tract (CKUT) Anomalies
CS-DSDDisorders of Sex Development
CS-EDEctodermal Dysplasia
CS-FAFanconi Anemia
CS-AnemiaHemolytic Anemia
CS-HeterotaxyHeterotaxy
CS-IBDInflammatory Bowel Disease
CS-MaleInfMale Infertility
CS-WWSMuscular dystropy-dystroglycanopathy (Walker-Warburg)
CS-NephroticNephrotic Syndrome
CS-ObesityObesity
CS-PPKCIPalmoplantar keratoderma plus congenital ichthyosis
CS-PKDPolycystic Kidney Disease
CS-Primary ImmunodefPrimary Immunodeficiency
CS-RhabdoRhabdomyolysis
CS-SRTDShort-Rib Thoracic Dysplasia
CS-VACTERLVACTERL Association
CS-WSWaardenburg Syndrome